This project implements a complete RNA-seq analysis pipeline to investigate transcriptional changes in Bone Marrow Adipocyte Tissue (BMAT) and Multiple Myeloma (MM) cells when co-cultured together ...

Dual RNA-sequencing enables simultaneous profiling of protein-coding and non-coding transcripts from two interacting organisms, an essential capability when physical separation is difficult, such as ...

RNA sequencing (RNA-seq) is a powerful tool in diagnosing Mendelian disorders, but the optimized sequencing depth for this technology has not yet been determined. In a new study published in the ...

notebooks_2020_10_08_bulk_RNAseq_pathwayAnalysis.ipynb - a bulk RNAseq analysis tutorial I wrote using kallisto quantified data (R) youtube link for a walkthrough of ...

Abstract: In the digital era, the rapid proliferation of RNA sequencing (RNA-Seq) has uncovered vast datasets, particularly in liver-specific gene expression, yet the complexity of such ...

mRNA Market Surges: The global mRNA market is booming, fueled by the success of COVID-19 vaccines, with applications expanding to cancer and genetic disorders. Driven by public-private investments, ...

This study presents a useful finding for the ferroptosis-mediated tumor microenvironment (TME) in triple-negative breast cancer (TNBC) using public single-cell RNA sequencing (scRNA-seq) and bulk RNA ...

This study aims to explore the ferroptosis-related immune landscape of TNBC through the integration of single-cell and bulk RNA sequencing data, followed by the development of a risk prediction model ...

Department of Radiation Oncology, The Second Affiliated Hospital of Zhengzhou University, Henan, China Objective: This study aims to explore the impact of APE1 gene knockout on the transcriptome of ...